PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0809s0126.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 233aa    MW: 26011.1 Da    PI: 8.0847
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0809s0126.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.5e-3044102259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                           D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers+ d + +++tY+++Hnh+
  Kaladp0809s0126.1.p  44 ADSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSRMDASKLIVTYTSTHNHP 102
                          69************************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.0E-3136104IPR003657WRKY domain
SuperFamilySSF1182903.92E-2541104IPR003657WRKY domain
SMARTSM007745.7E-3443103IPR003657WRKY domain
PROSITE profilePS5081130.97445104IPR003657WRKY domain
PfamPF031063.2E-2545102IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MEGSPQPSPE TQAAKKGKPL HKTVVTLKVV AASCGKQKNE GPPADSWSWR KYGQKPIKGS  60
PYPRGYYRCS TSKGCSAKKQ VERSRMDASK LIVTYTSTHN HPGPNLTTQN REEIQEPSTA  120
EIGAEPKVEK PAAADEQRQN NTENFNYMEP RQDVTGHIDR SPFSVVLDST HESLGVLFHE  180
KPISHPPIRT SPKQESDGYD FFDELEELPM SLPFTSFMKS SFYDDRILVR PS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-17451041674WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002270750.31e-78PREDICTED: probable WRKY transcription factor 65
TrEMBLD7U2J01e-78D7U2J0_VITVI; Putative uncharacterized protein
STRINGVIT_07s0005g01520.t014e-78(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-35WRKY DNA-binding protein 69